FRISC: The Faculty Research Interests Science Comparator

Kevin H. Gardner, Ph.D.
Assistant Professor of Biochemistry
Biological Chemistry
Molecular Biophysics
Phone: (214) 648-8916
FAX: (214) 648-8947
Email: kgardn@biochem.swmed.edu
Home Page: Gardner Lab

New This Month | New This Year | Abstract | Selected Publications | FRISC Statistics Results - FULL MEDLINE:

Global folds of highly deuterated, methyl-protonated proteins by multidimensional NMR.
K H Gardner ... L E Kay
Biochemistry 1997 Feb; 36(6)1389-401.

Score: 0.817
NMR structures of proteins and protein complexes beyond 20,000 M(r).
G M Clore ... A M Gronenborn
Nat Struct Biol 1997 Oct; 4 Suppl()849-53.

Score: 0.609
The use of 2H, 13C, 15N multidimensional NMR to study the structure and dynamics of proteins.
K H Gardner ... L E Kay
Annu Rev Biophys Biomol Struct 1998 ; 27()357-406.

Score: 0.590
NMR structure determination of proteins and protein complexes larger than 20 kDa.
G M Clore ... A M Gronenborn
Curr Opin Chem Biol 1998 Oct; 2(5)564-70.

Score: 0.576
NMR spectroscopy of large molecules and multimolecular assemblies in solution.
G Wider ... K Wüthrich
Curr Opin Struct Biol 1999 Oct; 9(5)594-601.

Score: 0.536
Solution NMR spectroscopy beyond 25 kDa.
L E Kay ... K H Gardner
Curr Opin Struct Biol 1997 Oct; 7(5)722-31.

Score: 0.527
Protein phi and psi dihedral restraints determined from multidimensional hypersurface correlations of backbone chemical shifts and their use in the determination of protein tertiary structures.
R D Beger ... P H Bolton
J Biomol NMR 1997 Sep; 10(2)129-42.

Score: 0.524
Exploring the limits of precision and accuracy of protein structures determined by nuclear magnetic resonance spectroscopy.
G M Clore ... A M Gronenborn
J Mol Biol 1993 May; 231(1)82-102.

Score: 0.521
Uniform and residue-specific 15N-labeling of proteins on a highly deuterated background.
Jocelyne Fiaux ... Kurt Wüthrich
J Biomol NMR 2004 Jul; 29(3)289-97.

Score: 0.514
Use of very long-distance NOEs in a fully deuterated protein: an approach for rapid protein fold determination.
Leonardus M I Koharudin ... Rolf Boelens
J Magn Reson 2003 Aug; 163(2)228-35.

Score: 0.494
New developments in isotope labeling strategies for protein solution NMR spectroscopy.
N K Goto ... L E Kay
Curr Opin Struct Biol 2000 Oct; 10(5)585-92.

Score: 0.492
Determining the structures of large proteins and protein complexes by NMR.
G M Clore ... A M Gronenborn
Trends Biotechnol 1998 Jan; 16(1)22-34.

Score: 0.480
Application of amino acid type-specific 1H- and 14N-labeling in a 2H-, 15N-labeled background to a 47 kDa homodimer: potential for NMR structure determination of large proteins.
M J Kelly ... H Oschkinat
J Biomol NMR 1999 May; 14(1)79-83.

Score: 0.477
Selective methyl group protonation of perdeuterated proteins.
M K Rosen ... L E Kay
J Mol Biol 1996 Nov; 263(5)627-36.

Score: 0.475
Structures of protein complexes by multidimensional heteronuclear magnetic resonance spectroscopy.
A M Gronenborn ... G M Clore
Crit Rev Biochem Mol Biol 1995 ; 30(5)351-85.

Score: 0.461
New methods of structure refinement for macromolecular structure determination by NMR.
G M Clore ... A M Gronenborn
Proc Natl Acad Sci U S A 1998 May; 95(11)5891-8.

Score: 0.447
Multidimensional NMR methods for protein structure determination.
V Kanelis ... L E Kay
IUBMB Life 2001 Dec; 52(6)291-302.

Score: 0.445
Site-directed parallel spin-labeling and paramagnetic relaxation enhancement in structure determination of membrane proteins by solution NMR spectroscopy.
Binyong Liang ... Lukas K Tamm
J Am Chem Soc 2006 Apr; 128(13)4389-97.

Score: 0.441
An efficient and accurate algorithm for assigning nuclear overhauser effect restraints using a rotamer library ensemble and residual dipolar couplings.
Lincong Wang ... Bruce Randall Donald
Proc IEEE Comput Syst Bioinform Conf 2005 ; ()189-202.

Score: 0.438
NMR analysis of protein interactions.
Alexandre M J J Bonvin ... Robert Kaptein
Curr Opin Chem Biol 2005 Oct; 9(5)501-8.

Score: 0.438
Structures of protein-protein complexes are docked using only NMR restraints from residual dipolar coupling and chemical shift perturbations.
Mark A McCoy ... Daniel F Wyss
J Am Chem Soc 2002 Mar; 124(10)2104-5.

Score: 0.438
Young Investigator Award Lecture. Structures of larger proteins, protein-ligand and protein-DNA complexes by multidimensional heteronuclear NMR.
G M Clore ... A M Gronenborn
Protein Sci 1994 Mar; 3(3)372-90.

Score: 0.434
Global folds of proteins with low densities of NOEs using residual dipolar couplings: application to the 370-residue maltodextrin-binding protein.
G A Mueller ... L E Kay
J Mol Biol 2000 Jun; 300(1)197-212.

Score: 0.434
Application of sparse NMR restraints to large-scale protein structure prediction.
Wei Li ... Jeffrey Skolnick
Biophys J 2004 Aug; 87(2)1241-8.

Score: 0.433
GENFOLD: a genetic algorithm for folding protein structures using NMR restraints.
M J Bayley ... M P Williamson
Protein Sci 1998 Feb; 7(2)491-9.

Score: 0.432
On deriving spatial protein structure from NMR or X-ray diffraction data.
W F van Gunsteren ... R C van Schaik
Ciba Found Symp 1991 ; 161()150-9; discussion 159-66.

Score: 0.432
Expression of human chorionic gonadotropin uniformly labeled with NMR isotopes in Chinese hamster ovary cells: an advance toward rapid determination of glycoprotein structures.
J W Lustbader ... J M Brown
J Biomol NMR 1996 Jun; 7(4)295-304.

Score: 0.431
Evaluation of the utility of NMR structures determined from minimal NOE-based restraints for structure-based drug design, using MMP-1 as an example.
X Huang ... R Powers
Biochemistry 2000 Nov; 39(44)13365-75.

Score: 0.430
Accurate and rapid docking of protein-protein complexes on the basis of intermolecular nuclear overhauser enhancement data and dipolar couplings by rigid body minimization.
G M Clore
Proc Natl Acad Sci U S A 2000 Aug; 97(16)9021-5.

Score: 0.427
NMR study of the solution conformation of actinomycin D.
C Yu ... Y Y Tseng
Eur J Biochem 1992 Oct; 209(1)181-7.

Score: 0.425
High-resolution solution structure of the inhibitor-free catalytic fragment of human fibroblast collagenase determined by multidimensional NMR.
F J Moy ... R Powers
Biochemistry 1998 Feb; 37(6)1495-504.

Score: 0.424
A computer-based protocol for semiautomated assignments and 3D structure determination of proteins.
R P Meadows ... S W Fesik
J Biomol NMR 1994 Jan; 4(1)79-96.

Score: 0.423
Distance geometry and related methods for protein structure determination from NMR data.
W Braun
Q Rev Biophys 1987 May; 19(3-4)115-57.

Score: 0.421
Molecular dynamics and accuracy of NMR structures: effects of error bounds and data removal.
F R Chalaoux ... M Nilges
Proteins 1999 Mar; 34(4)453-63.

Score: 0.421
Solution structure and dynamics of integral membrane proteins by NMR: a case study involving the enzyme PagP.
Peter M Hwang ... Lewis E Kay
Methods Enzymol 2005 ; 394()335-50.

Score: 0.420
Solid-state NMR studies of the structure and mechanisms of proteins.
Lynmarie K Thompson
Curr Opin Struct Biol 2002 Oct; 12(5)661-9.

Score: 0.413
Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin.
M Nilges ... H Oschkinat
J Mol Biol 1997 Jun; 269(3)408-22.

Score: 0.409
Refinement of multidomain protein structures by combination of solution small-angle X-ray scattering and NMR data.
Alexander Grishaev ... Ad Bax
J Am Chem Soc 2005 Nov; 127(47)16621-8.

Score: 0.407
Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data.
J L Battiste ... G Wagner
Biochemistry 2000 May; 39(18)5355-65.

Score: 0.407
Effect of deuteration on the accuracy of HN-HN distance constraints.
D M Briercheck ... G S Rule
J Magn Reson 1998 Sep; 134(1)52-6.

Score: 0.407
TROSY and CRINEPT: NMR with large molecular and supramolecular structures in solution.
R Riek ... K Wüthrich
Trends Biochem Sci 2000 Oct; 25(10)462-8.

Score: 0.407
Determination of molecular alignment tensors without backbone resonance assignment: Aid to rapid analysis of protein-protein interactions.
Markus Zweckstetter
J Biomol NMR 2003 Sep; 27(1)41-56.

Score: 0.407
1H- and 19F-NMR approaches to the study of the structure of proteins larger than 25 kDa.
P G Gettins
Int J Biol Macromol 1994 Oct; 16(5)227-35.

Score: 0.405
TOUCHSTONEX: protein structure prediction with sparse NMR data.
Wei Li ... Jeffrey Skolnick
Proteins 2003 Nov; 53(2)290-306.

Score: 0.404
Solution structure of carbonmonoxy myoglobin determined from nuclear magnetic resonance distance and chemical shift constraints.
K Osapay ... D A Case
J Mol Biol 1994 Nov; 244(2)183-97.

Score: 0.404
Improving the accuracy of NMR structures of large proteins using pseudocontact shifts as long-range restraints.
Vadim Gaponenko ... R Andrew Byrd
J Biomol NMR 2004 Mar; 28(3)205-12.

Score: 0.402
Comparing atomistic simulation data with the NMR experiment: how much can NOEs actually tell us?
Bojan Zagrovic ... Wilfred F van Gunsteren
Proteins 2006 Apr; 63(1)210-8.

Score: 0.400
NMR methods for the study of protein structure and dynamics.
L E Kay
Biochem Cell Biol 1997 ; 75(1)1-15.

Score: 0.400
An isotope labeling strategy for methyl TROSY spectroscopy.
Vitali Tugarinov ... Lewis E Kay
J Biomol NMR 2004 Feb; 28(2)165-72.

Score: 0.399
Biophysical approaches to membrane protein structure determination.
A Arora ... L K Tamm
Curr Opin Struct Biol 2001 Oct; 11(5)540-7.

Score: 0.397
Protein structural class identification directly from NMR spectra using averaged chemical shifts.
S P Mielke ... V V Krishnan
Bioinformatics 2003 Nov; 19(16)2054-64.

Score: 0.394
Determination of solution structures of paramagnetic proteins by NMR.
D L Turner ... A V Xavier
Eur Biophys J 1998 ; 27(4)367-75.

Score: 0.394
Solid-state nuclear magnetic resonance characterization of gramicidin channel structure.
T A Cross
Methods Enzymol 1997 ; 289()672-96.

Score: 0.392
Generation of high-resolution protein structures in solution from multidimensional NMR.
T L James ... V J Basus
Annu Rev Phys Chem 1991 ; 42()501-42.

Score: 0.389
The high-resolution, three-dimensional solution structure of human interleukin-4 determined by multidimensional heteronuclear magnetic resonance spectroscopy.
R Powers ... G M Clore
Biochemistry 1993 Jul; 32(26)6744-62.

Score: 0.389
Three-dimensional structure of proteins determined by molecular dynamics with interproton distance restraints: application to crambin.
A T Brünger ... M Karplus
Proc Natl Acad Sci U S A 1986 Jun; 83(11)3801-5.

Score: 0.388
Intein-based biosynthetic incorporation of unlabeled protein tags into isotopically labeled proteins for NMR studies.
Sara Züger ... Hideo Iwai
Nat Biotechnol 2005 Jun; 23(6)736-40.

Score: 0.388
High-resolution solution structure of basic fibroblast growth factor determined by multidimensional heteronuclear magnetic resonance spectroscopy.
F J Moy ... R Powers
Biochemistry 1996 Oct; 35(42)13552-61.

Score: 0.388
Solution structure of recombinant hirudin and the Lys-47----Glu mutant: a nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing study.
P J Folkers ... A M Gronenborn
Biochemistry 1989 Mar; 28(6)2601-17.

Score: 0.388
Differential isotype labeling strategy for determining the structure of myristoylated recoverin by NMR spectroscopy.
T Tanaka ... M Ikura
J Biomol NMR 1998 Feb; 11(2)135-52.

Score: 0.385
Protein structure determination in solution by two-dimensional and three-dimensional nuclear magnetic resonance spectroscopy.
A M Gronenborn ... G M Clore
Anal Chem 1990 Jan; 62(1)2-15.

Score: 0.385
Exhaustive enumeration of protein conformations using experimental restraints.
R S DeWitte ... E I Shakhnovich
Protein Sci 1995 Sep; 4(9)1780-91.

Score: 0.385
Six years of protein structure determination by NMR spectroscopy: what have we learned?
K Wüthrich
Ciba Found Symp 1991 ; 161()136-45; discussion 145-9.

Score: 0.383
Solution structure of recombinant human interleukin-6.
G Y Xu ... D A Cumming
J Mol Biol 1997 May; 268(2)468-81.

Score: 0.382
Solution structure of a polypeptide dimer comprising the fourth Ca(2+)-binding site of troponin C by nuclear magnetic resonance spectroscopy.
L E Kay ... C M Kay
Biochemistry 1991 Apr; 30(17)4323-33.

Score: 0.382
NMR studies of protein structure and dynamics.
Lewis E Kay
J Magn Reson 2005 Apr; 173(2)193-207.

Score: 0.381
The solution conformation of the antibacterial peptide cecropin A: a nuclear magnetic resonance and dynamical simulated annealing study.
T A Holak ... G M Clore
Biochemistry 1988 Oct; 27(20)7620-9.

Score: 0.381
The influence of stereospecific assignments on the determination of three-dimensional structures of proteins by nuclear magnetic resonance spectroscopy. Application to the sea anemone protein BDS-I.
P C Driscoll ... G M Clore
FEBS Lett 1989 Jan; 243(2)223-33.

Score: 0.381
A branch and bound algorithm for protein structure refinement from sparse NMR data sets.
D M Standley ... A E McDermott
J Mol Biol 1999 Jan; 285(4)1691-710.

Score: 0.380
Three-dimensional structure in solution of barwin, a protein from barley seed.
S Ludvigsen ... F M Poulsen
Biochemistry 1992 Sep; 31(37)8783-9.

Score: 0.379
Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy.
Federica Castellani ... Hartmut Oschkinat
Nature 2002 Nov; 420(6911)98-102.

Score: 0.379
Determination of the three-dimensional solution structure of barnase using nuclear magnetic resonance spectroscopy.
M Bycroft ... F M Poulsen
Biochemistry 1991 Sep; 30(35)8697-701.

Score: 0.378
A computational method for NMR-constrained protein threading.
Y Xu ... J R Einstein
J Comput Biol 2000 ; 7(3-4)449-67.

Score: 0.378
A refined solution structure of hen lysozyme determined using residual dipolar coupling data.
H Schwalbe ... L J Smith
Protein Sci 2001 Apr; 10(4)677-88.

Score: 0.378
Structures of larger proteins in solution: three- and four-dimensional heteronuclear NMR spectroscopy.
G M Clore ... A M Gronenborn
Science 1991 Jun; 252(5011)1390-9.

Score: 0.378
Improvement of hydrogen bond geometry in protein NMR structures by residual dipolar couplings--an assessment of the interrelation of NMR restraints.
Pernille Rose Jensen ... Flemming M Poulsen
J Biomol NMR 2004 Jan; 28(1)31-41.

Score: 0.377
Quantitative evaluation of experimental NMR restraints.
Sander B Nabuurs ... Geerten W Vuister
J Am Chem Soc 2003 Oct; 125(39)12026-34.

Score: 0.377
Solution conformation of cobrotoxin: a nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing study.
C Yu ... C C Yang
Biochemistry 1993 Mar; 32(9)2131-6.

Score: 0.376
Triple-resonance NOESY-based experiments with improved spectral resolution: applications to structural characterization of unfolded, partially folded and folded proteins.
O Zhang ... L E Kay
J Biomol NMR 1997 Feb; 9(2)181-200.

Score: 0.376
Investigation of the solution structure of chymotrypsin inhibitor 2 using molecular dynamics: comparison to x-ray crystallographic and NMR data.
A Li ... V Daggett
Protein Eng 1995 Nov; 8(11)1117-28.

Score: 0.375
Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases.
J Kuszewski ... G M Clore
Protein Sci 1996 Jun; 5(6)1067-80.

Score: 0.375
A proton nuclear magnetic resonance study of the conformation of bovine anaphylatoxin C5a in solution.
J Zarbock ... A M Gronenborn
FEBS Lett 1988 Oct; 238(2)289-94.

Score: 0.375
A strategy to obtain backbone resonance assignments of deuterated proteins in the presence of incomplete amide 2H/1H back-exchange.
Frank Löhr ... Heinz Rüterjans
J Biomol NMR 2003 Apr; 25(4)291-311.

Score: 0.375
Solution structure of cyclosporin A and a nonimmunosuppressive analog bound to fully deuterated cyclophilin.
V L Hsu ... I M Armitage
Biochemistry 1992 Dec; 31(51)12778-84.

Score: 0.375
Rapid analysis of large protein-protein complexes using NMR-derived orientational constraints: the 95 kDa complex of LpxA with acyl carrier protein.
Nitin U Jain ... James H Prestegard
J Mol Biol 2004 Nov; 343(5)1379-89.

Score: 0.374
NMR structure determination and investigation using a reduced proton (REDPRO) labeling strategy for proteins.
Alexander Shekhtman ... David Cowburn
FEBS Lett 2002 Jul; 524(1-3)177-82.

Score: 0.374
Solution structure of T4moC, the Rieske ferredoxin component of the toluene 4-monooxygenase complex.
Lars Skjeldal ... Brian G Fox
J Biol Inorg Chem 2004 Dec; 9(8)945-53.

Score: 0.374
High-resolution three-dimensional structure of reduced recombinant human thioredoxin in solution.
J D Forman-Kay ... A M Gronenborn
Biochemistry 1991 Mar; 30(10)2685-98.

Score: 0.374
The effect of selective deuteration on magnetization transfer in larger proteins.
R Pachter ... O Jardetzky
J Biomol NMR 1992 Mar; 2(2)183-94.

Score: 0.374
SOS-NMR: a saturation transfer NMR-based method for determining the structures of protein-ligand complexes.
Philip J Hajduk ... Bruce A Beutel
J Am Chem Soc 2004 Mar; 126(8)2390-8.

Score: 0.374
Determination of the three-dimensional structure of hordothionin-alpha by nuclear magnetic resonance.
K H Han ... S M Kim
Biochem J 1996 Feb; 313 ( Pt 3)()885-92.

Score: 0.373
The NMR solution structure of intestinal fatty acid-binding protein complexed with palmitate: application of a novel distance geometry algorithm.
M E Hodsdon ... D P Cistola
J Mol Biol 1996 Dec; 264(3)585-602.

Score: 0.372
NMR analysis of methyl groups at 100-500 kDa: model systems and Arp2/3 complex.
Mara Kreishman-Deitrick ... Michael K Rosen
Biochemistry 2003 Jul; 42(28)8579-86.

Score: 0.371
Side-chain H and C resonance assignment in protonated/partially deuterated proteins using an improved 3D(13)C-detected HCC-TOCSY.
Kaifeng Hu ... Konstantin Pervushin
J Magn Reson 2005 Jun; 174(2)200-8.

Score: 0.371
NMR spectroscopy of peptides and proteins. Practical considerations.
M G Hinds ... R S Norton
Mol Biotechnol 1997 Jun; 7(3)315-31.

Score: 0.371
RECOORD: a recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank.
Aart J Nederveen ... Alexandre M J J Bonvin
Proteins 2005 Jun; 59(4)662-72.

Score: 0.371
NMR structure of a cyclic polyamide-DNA complex.
Qing Zhang ... David E Wemmer
J Am Chem Soc 2004 Jun; 126(25)7958-66.

Score: 0.370
Three-dimensional structures of gonadotropins.
J W Lustbader ... R E Canfield
Mol Cell Endocrinol 1996 Dec; 125(1-2)21-31.

Score: 0.370
Determination of multiple ***φ***-torsion angles in proteins by selective and extensive (13)C labeling and two-dimensional solid-state NMR.
M Hong
J Magn Reson 1999 Aug; 139(2)389-401.

Score: 0.370
Four-dimensional heteronuclear triple-resonance NMR spectroscopy of interleukin-1 beta in solution.
L E Kay ... A M Gronenborn
Science 1990 Jul; 249(4967)411-4.

Score: 0.370
Use of fully deuterated micelles for conformational studies of membrane proteins by high resolution 1H nuclear magnetic resonance.
L R Brown
Biochim Biophys Acta 1979 Oct; 557(1)135-48.

Score: 0.369
Expression, refolding, and isotopic labeling of human serum albumin domains for NMR spectroscopy.
H Mao ... S W Fesik
Protein Expr Purif 2000 Dec; 20(3)492-9.

Score: 0.369
NMR techniques for identifying the interface of a larger protein-protein complex: cross-saturation and transferred cross-saturation experiments.
Ichio Shimada
Methods Enzymol 2005 ; 394()483-506.

Score: 0.369
NMR structural studies of membrane proteins.
F M Marassi ... S J Opella
Curr Opin Struct Biol 1998 Oct; 8(5)640-8.

Score: 0.368
Three-dimensional solution NMR structure of Apo-L75F-TrpR, a temperature-sensitive mutant of the tryptophan repressor protein.
Robert Tyler ... Valérie Copié
Biochemistry 2002 Oct; 41(40)11954-62.

Score: 0.368
Biosynthetic site-specific (13) C labeling of the light-harvesting 2 protein complex: a model for solid state NMR structure determination of transmembrane proteins.
A J van Gammeren ... H J M de Groot
J Biomol NMR 2004 Nov; 30(3)267-74.

Score: 0.368
Ile, Leu, and Val methyl assignments of the 723-residue malate synthase G using a new labeling strategy and novel NMR methods.
Vitali Tugarinov ... Lewis E Kay
J Am Chem Soc 2003 Nov; 125(45)13868-78.

Score: 0.368
Application of 1H NMR chemical shifts to measure the quality of protein structures.
M P Williamson ... T Asakura
J Mol Biol 1995 Apr; 247(4)541-6.

Score: 0.368
NMR structure of cysteinyl-phosphorylated enzyme IIB of the N,N'-diacetylchitobiose-specific phosphoenolpyruvate-dependent phosphotransferase system of Escherichia coli.
E Ab ... R M Scheek
J Mol Biol 2001 May; 308(5)993-1009.

Score: 0.368
Refinement of NMR structures using implicit solvent and advanced sampling techniques.
Jianhan Chen ... Charles L Brooks
J Am Chem Soc 2004 Dec; 126(49)16038-47.

Score: 0.368
Resonance assignments and solution structure of the second RNA-binding domain of sex-lethal determined by multidimensional heteronuclear magnetic resonance.
A L Lee ... D E Wemmer
Biochemistry 1994 Nov; 33(46)13775-86.

Score: 0.367
BioMagResBank databases DOCR and FRED containing converted and filtered sets of experimental NMR restraints and coordinates from over 500 protein PDB structures.
Jurgen F Doreleijers ... Eldon L Ulrich
J Biomol NMR 2005 May; 32(1)1-12.

Score: 0.366
A novel method for the biosynthesis of deuterated proteins with selective protonation at the aromatic rings of Phe, Tyr and Trp.
Sundaresan Rajesh ... Yutaka Ito
J Biomol NMR 2003 Sep; 27(1)81-6.

Score: 0.366
Structure and dynamics of MarA-DNA complexes: an NMR investigation.
B Dangi ... A M Gronenborn
J Mol Biol 2001 Nov; 314(1)113-27.

Score: 0.366
Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase I from Trichoderma reesei. A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing.
J Kraulis ... A M Gronenborn
Biochemistry 1989 Sep; 28(18)7241-57.

Score: 0.366
An algebraic geometry approach to protein structure determination from NMR data.
Lincong Wang ... Bruce Randall Donald
Proc IEEE Comput Syst Bioinform Conf 2005 ; ()235-46.

Score: 0.366
Structure determination of protein complexes by NMR.
Daniel Nietlispach ... Ernest D Laue
Methods Mol Biol 2004 ; 278()255-88.

Score: 0.366
The solution structure of melanoma growth stimulating activity.
W J Fairbrother ... R Horuk
J Mol Biol 1994 Sep; 242(3)252-70.

Score: 0.365
Prospects for resonance assignments in multidimensional solid-state NMR spectra of uniformly labeled proteins.
R Tycko
J Biomol NMR 1996 Oct; 8(3)239-51.

Score: 0.365
Solution structures of the R6 human insulin hexamer,.
X Chang ... J J Led
Biochemistry 1997 Aug; 36(31)9409-22.

Score: 0.365
Three-dimensional NMR spectroscopy of a protein in solution.
H Oschkinat ... G M Clore
Nature 1988 Mar; 332(6162)374-6.

Score: 0.364
Theoretical and computational advances in biomolecular NMR spectroscopy.
G Marius Clore ... Charles D Schwieters
Curr Opin Struct Biol 2002 Apr; 12(2)146-53.

Score: 0.364
Evaluation of site-directed spin labeling for characterizing protein-ligand complexes using simulated restraints.
K L Constantine
Biophys J 2001 Sep; 81(3)1275-84.

Score: 0.363
Optimal isotope labelling for NMR protein structure determinations.
Masatsune Kainosho ... Peter Güntert
Nature 2006 Mar; 440(7080)52-7.

Score: 0.362
NMR methods for studying the structure and dynamics of RNA.
Michael P Latham ... Arthur Pardi
Chembiochem 2005 Sep; 6(9)1492-505.

Score: 0.362
Determination of solid-state NMR structures of proteins by means of three-dimensional 15N-13C-13C dipolar correlation spectroscopy and chemical shift analysis.
Federica Castellani ... Hartmut Oschkinat
Biochemistry 2003 Oct; 42(39)11476-83.

Score: 0.362
Three-dimensional structure of the FK506 binding protein/ascomycin complex in solution by heteronuclear three- and four-dimensional NMR.
R P Meadows ... S W Fesik
Biochemistry 1993 Jan; 32(3)754-65.

Score: 0.361
The three-dimensional high resolution structure of human interferon alpha-2a determined by heteronuclear NMR spectroscopy in solution.
W Klaus ... H Senn
J Mol Biol 1997 Dec; 274(4)661-75.

Score: 0.360
Expression of deuterium-isotope-labelled protein in the yeast pichia pastoris for NMR studies.
W D Morgan ... J Feeney
J Biomol NMR 2000 Aug; 17(4)337-47.

Score: 0.360
Shaker pore structure as predicted by annealed atomic simulation using symmetry and novel geometric restraints.
P K Yang ... M J Hwang
Biophys J 1997 Jun; 72(6)2479-89.

Score: 0.360
Low resolution structure of interleukin-1 beta in solution derived from 1H-15N heteronuclear three-dimensional nuclear magnetic resonance spectroscopy.
G M Clore ... A M Gronenborn
J Mol Biol 1990 Aug; 214(4)811-7.

Score: 0.359
Strategy for supplementing structure calculations using limited data with hydrophobic distance restraints.
Andrei T Alexandrescu
Proteins 2004 Jul; 56(1)117-29.

Score: 0.359
Amino acid-type edited NMR experiments for methyl-methyl distance measurement in 13C-labeled proteins.
Hélène Van Melckebeke ... Bernhard Brutscher
J Am Chem Soc 2004 Aug; 126(31)9584-91.

Score: 0.358
The way to NMR structures of proteins.
K Wüthrich
Nat Struct Biol 2001 Nov; 8(11)923-5.

Score: 0.358
Solution NMR-derived global fold of a monomeric 82-kDa enzyme.
Vitali Tugarinov ... Lewis E Kay
Proc Natl Acad Sci U S A 2005 Jan; 102(3)622-7.

Score: 0.358
Computational methods for determining protein structures from NMR data.
G P Gippert ... D A Case
Biochem Pharmacol 1990 Jul; 40(1)15-22.

Score: 0.357
HADDOCK: a protein-protein docking approach based on biochemical or biophysical information.
Cyril Dominguez ... Alexandre M J J Bonvin
J Am Chem Soc 2003 Feb; 125(7)1731-7.

Score: 0.357
The three-dimensional structure of acyl-coenzyme A binding protein from bovine liver: structural refinement using heteronuclear multidimensional NMR spectroscopy.
K V Andersen ... F M Poulsen
J Biomol NMR 1993 May; 3(3)271-84.

Score: 0.356
Side chain NMR assignments in the membrane protein OmpX reconstituted in DHPC micelles.
Christian Hilty ... Kurt Wüthrich
J Biomol NMR 2002 Aug; 23(4)289-301.

Score: 0.356
MONSSTER: a method for folding globular proteins with a small number of distance restraints.
J Skolnick ... A R Ortiz
J Mol Biol 1997 Jan; 265(2)217-41.

Score: 0.356
Solution structure of omega-conotoxin GVIA using 2-D NMR spectroscopy and relaxation matrix analysis.
J H Davis ... V J Basus
Biochemistry 1993 Jul; 32(29)7396-405.

Score: 0.356
Solution structure of the GTPase activating domain of alpha s.
D R Benjamin ... I D Kuntz
J Mol Biol 1995 Dec; 254(4)681-91.

Score: 0.356
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Score: 0.346
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Simulated annealing with restrained molecular dynamics using CONGEN: energy refinement of the NMR solution structures of epidermal and type-alpha transforming growth factors.
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How much NMR data is required to determine a protein-ligand complex structure?
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Solution structure of the DNA-binding domain of a human papillomavirus E2 protein: evidence for flexible DNA-binding regions.
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Three-dimensional structure of a type VI turn in a linear peptide in water solution. Evidence for stacking of aromatic rings as a major stabilizing factor.
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Limits of NMR structure determination using variable target function calculations: ribonuclease T1, a case study.
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Three-dimensional heteronuclear NMR studies of RNA.
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Score: 0.343
The three-dimensional structure in solution (pH 5.8) of a DNA 9-mer duplex containing 1,N2-propanodeoxyguanosine opposite deoxyadenosine. Restrained molecular dynamics and NOE-based refinement calculations.
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Determination of three-dimensional structures of proteins by simulated annealing with interproton distance restraints. Application to crambin, potato carboxypeptidase inhibitor and barley serine proteinase inhibitor 2.
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Solution structure of the ribosomal protein S19 from Thermus thermophilus.
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Score: 0.342
Conformation of desmopressin, an analogue of the peptide hormone vasopressin, in aqueous solution as determined by NMR spectroscopy.
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Recent developments in solid-state magic-angle spinning, nuclear magnetic resonance of fully and significantly isotopically labelled peptides and proteins.
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Determination of three-dimensional solution structure of waglerin I, a toxin from Trimeresurus wagleri, using 2D-NMR and molecular dynamics simulation.
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Three-dimensional structure of the human immunodeficiency virus type 1 matrix protein.
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High-resolution solution structure of the catalytic fragment of human collagenase-3 (MMP-13) complexed with a hydroxamic acid inhibitor.
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NMR solution structure of an oxidised thioredoxin h from the eukaryotic green alga Chlamydomonas reinhardtii.
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A reassessment of the structure of chymotrypsin inhibitor 2 (CI-2) using time-averaged NMR restraints.
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Determination of the solution structures of domains II and III of protein G from Streptococcus by 1H nuclear magnetic resonance.
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Stable isotope labeling of Arabidopsis thaliana for an NMR-based metabolomics approach.
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Discrete backbone disorder in the nuclear magnetic resonance structure of apo intestinal fatty acid-binding protein: implications for the mechanism of ligand entry.
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Validation of NMR side-chain conformations by packing calculations.
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Four-dimensional 13C/13C-edited nuclear Overhauser enhancement spectroscopy of a protein in solution: application to interleukin 1 beta.
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Score: 0.337
Solution structure of human corticotropin releasing factor by 1H NMR and distance geometry with restrained molecular dynamics.
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Distinguishing structural and functional restraints in evolution in order to identify interaction sites.
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Specific labeling of Candida tropicalis peroxisomal proteins with photoreactive fatty-acid derivatives.
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Recent developments in structural proteomics for protein structure determination.
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How accurately and precisely can RNA structure be determined by NMR?
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Messages from ultrahigh resolution crystal structures.
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Human interleukin 4. The solution structure of a four-helix bundle protein.
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Paramagnetic NMR spectroscopy and density functional calculations in the analysis of the geometric and electronic structures of iron-sulfur proteins.
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Three-dimensional solution structure of Callinectes sapidus metallothionein-1 determined by homonuclear and heteronuclear magnetic resonance spectroscopy.
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Rapid assessment of protein structural stability and fold validation via NMR.
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An advantage for use of isotope labeling and NMR chemical shifts to analyze the structure of four homologous IgG-binding domains of staphylococcal protein A.
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3D H(aro)-NOESY-CH3NH and C(aro)-NOESY-CH3NH experiments for double labeled proteins.
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High resolution solution structure of apo calcyclin and structural variations in the S100 family of calcium-binding proteins.
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A refined model for the solution structure of oxidized putidaredoxin.
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Application of molecular dynamics with interproton distance restraints to three-dimensional protein structure determination. A model study of crambin.
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Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures.
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