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RIC: Research Interest Comparator

Hu, Jianjun, Ph.D.
Affiliation: University of Southern California
Email: hujianju@gmail.com
Home Page: not provided
New This Month | New This Year | Abstract | Selected Publications | RIC Statistics Results - FULL MEDLINE:

	How does gene expression clustering work? Patrik D'haeseleer Nat Biotechnol 2005 Dec; 23(12)1499-501.	Score: 0.796
	Missing value estimation methods for DNA microarrays. O Troyanskaya ... R B Altman Bioinformatics 2001 Jun; 17(6)520-5.	Score: 0.780
	Simultaneous classification and feature clustering using discriminant vector quantization with applications to microarray data analysis. Jia Li ... Hongyuan Zha Proc IEEE Comput Soc Bioinform Conf 2002 ; 1()246-55.	Score: 0.763
	DPT: is the missing link still missing? C M Magistro Phys Ther 1998 Jul; 78(7)782-3.	Score: 0.717
	Underwater birth: missing the evidence or missing the point? Kelley Bowden ... Elizabeth Wilson Pediatrics 2003 Oct; 112(4)972-3.	Score: 0.717
	Gaussian mixture clustering and imputation of microarray data. Ming Ouyang ... Panos Georgopoulos Bioinformatics 2004 Apr; 20(6)917-23.	Score: 0.714
	Mixture modelling of gene expression data from microarray experiments. Debashis Ghosh ... Arul M Chinnaiyan Bioinformatics 2002 Feb; 18(2)275-86.	Score: 0.713
	LSimpute: accurate estimation of missing values in microarray data with least squares methods. Trond Hellem Bø ... Inge Jonassen Nucleic Acids Res 2004 ; 32(3)e34.	Score: 0.704
	Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data. Lisa M McShane ... Richard Simon Bioinformatics 2002 Nov; 18(11)1462-9.	Score: 0.695
	Supervised cluster analysis for microarray data based on multivariate Gaussian mixture. Yi Qu ... Shizhong Xu Bioinformatics 2004 Aug; 20(12)1905-13.	Score: 0.683
	Failed to fetch article title! Article may not be available.	Score: 0.676
	Clustering. J A Hartigan Annu Rev Biophys Bioeng 1973 ; 2()81-101.	Score: 0.676
	Analysis of large-scale gene expression data. G Sherlock Curr Opin Immunol 2000 Apr; 12(2)201-5.	Score: 0.673
	Clustering gene expression data with kernel principal components. Zhenqiu Liu ... Ying Xu J Bioinform Comput Biol 2005 Apr; 3(2)303-16.	Score: 0.667
	The real value of microarray technology. Hannah Brown Lancet Oncol 2003 Jun; 4(6)326.	Score: 0.667
	A missing denture. Atsunobu Tsunoda ... Seiji Kishimoto Lancet 2004 Nov 20-26; 364(9448)1884.	Score: 0.666
	Failed to fetch article title! Article may not be available.	Score: 0.666
	Missing data. Prescrire Int 2002 Jun; 11(59)92.	Score: 0.666
	Are we missing something? Sylvia Talkington Home Healthc Nurse 2005 Jul; 23(7)476.	Score: 0.666
	Missing tails. Br Med J 1977 Mar; 1(6062)713-4.	Score: 0.666
	Failed to fetch article title! Article may not be available.	Score: 0.666
	The missing ingredient? Int J Health Care Qual Assur 1994 ; 7(4)28.	Score: 0.666
	Missing teeth. J Am Dent Assoc 1978 Jun; 96(6)978.	Score: 0.666
	Missing out. J Girvin Nurs Times 1991 Apr 17-23; 87(16)49.	Score: 0.666
	A missing piece on the Y. Nat Genet 1995 Aug; 10(4)367-8.	Score: 0.666
	The missing patients. Br Dent J 1984 Mar; 156(5)158-9.	Score: 0.666
	The missing evidence. A C Barnes Perspect Biol Med 1970 ; 14(1)53-62.	Score: 0.666
	A missing dimension. Aust Nurses J 1980 Apr; 9(9)10-2.	Score: 0.666
	THE MISSING infant. Practitioner 1956 Jun; 176(1056)675.	Score: 0.666
	Failed to fetch article title! Article may not be available.	Score: 0.666
	Missing threads. Lancet 1979 Apr; 1(8120)811.	Score: 0.666
	Missing loop. Br Med J 1968 Apr; 2(5598)177.	Score: 0.666
	Genesis: cluster analysis of microarray data. Alexander Sturn ... Zlatko Trajanoski Bioinformatics 2002 Jan; 18(1)207-8.	Score: 0.664
	Influence of microarrays experiments missing values on the stability of gene groups by hierarchical clustering. Alexandre G de Brevern ... Alain Malpertuy BMC Bioinformatics 2004 Aug; 5()114.	Score: 0.663
	Fuzzy J-Means and VNS methods for clustering genes from microarray data. Nabil Belacel ... Rodney Ouellette Bioinformatics 2004 Jul; 20(11)1690-701.	Score: 0.662
	Oligonucleotide microarray analysis of gene expression in leukemia. Frederik W van Delft ... Louise K Jones Methods Mol Med 2004 ; 91()183-96.	Score: 0.660
	Microarray analysis of gene expression in the embryonic lung. Sui Lin ... John M Shannon Chest 2002 Mar; 121(3 Suppl)80S-81S.	Score: 0.660
	Coupled two-way clustering analysis of gene microarray data. G Getz ... E Domany Proc Natl Acad Sci U S A 2000 Oct; 97(22)12079-84.	Score: 0.656
	An evolutionary approach for gene expression patterns. Huai-Kuang Tsai ... Cheng-Yan Kao IEEE Trans Inf Technol Biomed 2004 Jun; 8(2)69-78.	Score: 0.656
	A new clustering method for microarray data analysis. Louxin Zhang ... Song Zhu Proc IEEE Comput Soc Bioinform Conf 2002 ; 1()268-75.	Score: 0.655
	Singular value decomposition regression models for classification of tumors from microarray experiments. Debashis Ghosh Pac Symp Biocomput 2002 ; ()18-29.	Score: 0.640
	MILVA: an interactive tool for the exploration of multidimensional microarray data. Davide D'Alimonte ... Colin P Smith Bioinformatics 2005 Nov; 21(22)4192-3.	Score: 0.639
	Microarray databases: storage and retrieval of microarray data. Gavin Sherlock ... Catherine A Ball Methods Mol Biol 2003 ; 224()235-48.	Score: 0.635
	The case of the missing animal is also a report with missing data. L P Williams Pediatr Infect Dis J 1990 Jun; 9(6)456.	Score: 0.634
	Missing Alzheimer's gene found. M Barinaga Science 1995 Aug; 269(5226)917-8.	Score: 0.630
	Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study. Junbai Wang ... Ola Myklebost BMC Bioinformatics 2002 Nov; 3()36.	Score: 0.627
	Combining hierarchical clustering and self-organizing maps for exploratory analysis of gene expression patterns. Javier Herrero ... Joaquín Dopazo J Proteome Res 2002 Sep-Oct; 1(5)467-70.	Score: 0.615
	Microarray data analysis: from hypotheses to conclusions using gene expression data. Nicola J Armstrong ... Mark A van de Wiel Cell Oncol 2004 ; 26(5-6)279-90.	Score: 0.612
	Noise-robust soft clustering of gene expression time-course data. Matthias E Futschik ... Bronwyn Carlisle J Bioinform Comput Biol 2005 Aug; 3(4)965-88.	Score: 0.611
	An integrated tool for microarray data clustering and cluster validity assessment. Nadia Bolshakova ... Pádraig Cunningham Bioinformatics 2005 Feb; 21(4)451-5.	Score: 0.606
	[Microarrays: technologies overview and data analysis] S S Ivakhno ... O I Korneliuk Ukr Biokhim Zh 2004 Mar-Apr; 76(2)5-19.	Score: 0.605
	Network constrained clustering for gene microarray data. Dongxiao Zhu ... Anand Swaroop Bioinformatics 2005 Nov; 21(21)4014-20.	Score: 0.605
	Expression Profiler: next generation--an online platform for analysis of microarray data. Misha Kapushesky ... Alvis Brazma Nucleic Acids Res 2004 Jul; 32(Web Server issue)W465-70.	Score: 0.603
	Methods for investigating localized clustering of disease. Second-order analysis of spatial clustering. P J Diggle ... S Morris IARC Sci Publ 1996 ; (135)207-14.	Score: 0.601
	Re: Effect of locust bean gum in anti-regurgitant milk on the regurgitation in uncomplicated gastroesophageal reflux. John W L Puntis J Pediatr Gastroenterol Nutr 2005 Jan; 40(1)101-2.	Score: 0.601
	mdclust--exploratory microarray analysis by multidimensional clustering. M Dugas ... P Dirschedl Bioinformatics 2004 Apr; 20(6)931-6.	Score: 0.601
	MAPS: a microarray project system for gene expression experiment information and data validation. P R Bushel ... C A Afshari Bioinformatics 2001 Jun; 17(6)564-5.	Score: 0.596
	Response to Pan et al., microarray gene analysis and expression profiles of Dupuytren's contracture. Paul K Wright Ann Plast Surg 2003 Nov; 51(5)528.	Score: 0.590
	Automatic construction of gene relation networks using text mining and gene expression data. Thomas Karopka ... Anne Glass Med Inform Internet Med 2004 Jun; 29(2)169-83.	Score: 0.590
	Microarray analysis of human nervous system gene expression in neurological disease. Steven A Greenberg Int Rev Neurobiol 2004 ; 60()135-51.	Score: 0.590
	Assessment of gene expression profile by cDNA microarray analysis. M Ghazizadeh ... T Araki J Nippon Med Sch 2001 Dec; 68(6)460-1.	Score: 0.590
	[DNA microarray for gene expression analysis of human oral cancer] Jiang Tao ... Zeng-tong Zhou Shanghai Kou Qiang Yi Xue 2003 Apr; 12(2)142-6.	Score: 0.590
	Comprehensive analysis of the effect of phytoestrogen, daidzein, on a testicular cell line, using mRNA and protein expression profile. Tetsuya Adachi ... Gozoh Tsujimoto Food Chem Toxicol 2005 Apr; 43(4)529-35.	Score: 0.588
	Immunohistochemical validation of expression microarray results. Lawrence True ... Ziding Feng J Mol Diagn 2005 May; 7(2)149-51.	Score: 0.588
	Clustering of correlated networks. S N Dorogovtsev Phys Rev E Stat Nonlin Soft Matter Phys 2004 Feb; 69(2 Pt 2)027104.	Score: 0.587
	The human genome: microarray expression analysis. J A Brockman ... C A Tamminga Am J Psychiatry 2001 Aug; 158(8)1199.	Score: 0.586
	Missing value estimation for DNA microarray gene expression data: local least squares imputation. Hyunsoo Kim ... Haesun Park Bioinformatics 2005 Jan; 21(2)187-98.	Score: 0.583
	GEPAS: A web-based resource for microarray gene expression data analysis. Javier Herrero ... Joaquín Dopazo Nucleic Acids Res 2003 Jul; 31(13)3461-7.	Score: 0.580
	Importing MAGE-ML format microarray data into BioConductor. Steffen Durinck ... Bart De Moor Bioinformatics 2004 Dec; 20(18)3641-2.	Score: 0.580
	From microarray data to results. Workshop on genomic approaches to microarray data analysis. Thomas Schlitt ... Patrick Kemmeren EMBO Rep 2004 May; 5(5)459-63.	Score: 0.578
	Clustering gene expression data based on predicted differential effects of GV interaction. Hai-Yan Pan ... Dan-Fu Han Genomics Proteomics Bioinformatics 2005 Feb; 3(1)36-41.	Score: 0.575
	Replication of a DNA microarray. Haohao Lin ... Richard M Crooks J Am Chem Soc 2005 Aug; 127(32)11210-1.	Score: 0.574
	The development of microarray standards. Morten T Andersen ... Carole A Foy Anal Bioanal Chem 2005 Jan; 381(1)87-9.	Score: 0.574
	The missing of missing mandibular frenulum in hypertrophic pyloric stenosis. Ori Hochwald ... Ron Shaoul J Pediatr Gastroenterol Nutr 2005 Jan; 40(1)101; author reply 100-1.	Score: 0.574
	Protein microarray technology. Thomas Joos Expert Rev Proteomics 2004 Jun; 1(1)1-3.	Score: 0.574
	Abnormal oral mucosal light reflectance in infantile hypertrophic pyloric stenosis. Stefano Parrini ... Claudio De Felice J Pediatr Gastroenterol Nutr 2004 Jul; 39(1)53-5.	Score: 0.574
	Optical microarray biosensors. Michael G Weller Anal Bioanal Chem 2005 Jan; 381(1)41-3.	Score: 0.574
	Microarray standards at last. Nature 2002 Sep; 419(6905)323.	Score: 0.574
	Living cell microarray. Anal Chem 2001 Jul; 73(13)349A.	Score: 0.574
	Consensus clustering and functional interpretation of gene-expression data. Stephen Swift ... Paul Kellam Genome Biol 2004 ; 5(11)R94.	Score: 0.572
	Assessing reliability of gene clusters from gene expression data. K Zhang ... H Zhao Funct Integr Genomics 2000 Nov; 1(3)156-73.	Score: 0.571
	cluML: A markup language for clustering and cluster validity assessment of microarray data. Nadia Bolshakova ... Pádraig Cunningham Appl Bioinformatics 2005 ; 4(3)211-3.	Score: 0.571
	[Research on gene expression data based on clustering/classification technology] Jie Li ... Xia Li Sheng Wu Gong Cheng Xue Bao 2005 Jul; 21(4)667-73.	Score: 0.570
	[The value of gene expression profiles using micoarrays for the individualisation of adjuvant therapy after surgery for breast cancer] J G M Klijn ... E G E de Vries Ned Tijdschr Geneeskd 2005 Mar; 149(12)618-22.	Score: 0.569
	Microarray gene expression database: progress towards an international repository of gene expression data. P Kellam Genome Biol 2001 ; 2(5)REPORTS4011.	Score: 0.568
	Kernel hierarchical gene clustering from microarray expression data. Jie Qin ... William Stafford Noble Bioinformatics 2003 Nov; 19(16)2097-104.	Score: 0.565
	Statistical methods for microarray assays. Paweł Krajewski ... Jan Bocianowski J Appl Genet 2002 ; 43(3)269-78.	Score: 0.564
	Microarray analysis of hepatic-regulated gene expression: specific applications and nonspecific problems. Michelle Craig Barton ... David N Stivers Hepatology 2002 Mar; 35(3)727-9.	Score: 0.563
	Searching for evidence of altered gene expression: a comment on statistical analysis of microarray data. J Wittes ... H P Friedman J Natl Cancer Inst 1999 Mar; 91(5)400-1.	Score: 0.563
	On combining multiple microarray studies for improved functional classification by whole-dataset feature selection. See-Kiong Ng ... V S Sundararajan Genome Inform 2003 ; 14()44-53.	Score: 0.561
	Clustering-based approaches to discovering and visualising microarray data patterns. Francisco Azuaje Brief Bioinform 2003 Mar; 4(1)31-42.	Score: 0.561
	CLIFF: clustering of high-dimensional microarray data via iterative feature filtering using normalized cuts. E P Xing ... R M Karp Bioinformatics 2001 ; 17 Suppl 1()S306-15.	Score: 0.561
	Fuzzy K-means clustering with missing values. M Sarkar ... T Y Leong Proc AMIA Symp 2001 ; ()588-92.	Score: 0.558
	Evaluation of gene importance in microarray data based upon probability of selection. Li M Fu ... Casey S Fu-Liu BMC Bioinformatics 2005 ; 6()67.	Score: 0.558
	M@CBETH: a microarray classification benchmarking tool. Nathalie L M M Pochet ... Bart L R De Moor Bioinformatics 2005 Jul; 21(14)3185-6.	Score: 0.558
	A clustering technique in the classification of almost periodic waveforms. I Tomek Comput Biomed Res 1972 Dec; 5(6)621-8.	Score: 0.558
	Identification of azole-responsive genes by microarray technology: why are we missing the efflux transporter genes? D P Kontoyiannis ... G S May Antimicrob Agents Chemother 2001 Dec; 45(12)3674-6.	Score: 0.556
	A method for clustering gene expression data based on graph structure. Shigeto Seno ... Hideo Matsuda Genome Inform 2004 ; 15(2)151-60.	Score: 0.555
	The influence of missing value imputation on detection of differentially expressed genes from microarray data. Ida Scheel ... Arnoldo Frigessi Bioinformatics 2005 Dec; 21(23)4272-9.	Score: 0.555
	Analysis of large-scale gene expression data. G Sherlock Brief Bioinform 2001 Dec; 2(4)350-62.	Score: 0.554

Abstract:
microarray
gene expression analysis
clustering
classification
missing value

Keywords extracted from the abstract: [ eliminated words list ]

Count	Word
0.666	analysis
1.473	classification
2.703	clustering
0.904	expression
0.898	gene
2.813	microarray
2.664	missing
1.407	value

RIC Statistics:

Extraction Method: Keyword Count with Lexical Variants Added

Eliminated words list: MedlinePlus List

Weighting Method: Term Frequency * Inverse Document Frequency

Database: Medline abstracts (1967 - Present)

Publication Type: All

Score Calculation Method: Cosine Similarity Method

Sort by: Score

Submission date and time: 12-22-2005, 17:47:1

Computation time: 00:00:04

Last updated: Thursday, 22-Dec-2005 17:47:05 CST