RIC: Research Interest Comparator

Kar-wai Ng, Ph.D.
Researcher
Affiliation: Human Growth and Development
Office: not provided
Phone #: not provided
Fax: not provided
Email: kar-wai.ng@utsouthwestern.edu
Home Page: not provided
Lab: not provided
New This Month | New This Year | Abstract | Selected Publications | RIC Statistics Results - FULL MEDLINE:

PathoGene: a pathogen coding sequence discovery and analysis resource.
Kar-wai Ng ... Harold R Garner
Biotechniques 2004 Aug; 37(2)218, 220-2.
Score: 2.115
dbSNP: a database of single nucleotide polymorphisms.
E M Smigielski ... S T Sherry
Nucleic Acids Res 2000 Jan; 28(1)352-5.
Score: 0.728
dbSNP: the NCBI database of genetic variation.
S T Sherry ... K Sirotkin
Nucleic Acids Res 2001 Jan; 29(1)308-11.
Score: 0.727
Use of molecular variation in the NCBI dbSNP database.
S T Sherry ... K Sirotkin
Hum Mutat 2000 ; 15(1)68-75.
Score: 0.678
Database resources of the National Center for Biotechnology Information.
D L Wheeler ... B A Rapp
Nucleic Acids Res 2000 Jan; 28(1)10-4.
Score: 0.617
Microarray synthesis through multiple-use PCR primer design.
Rohan J Fernandes ... Steven S Skiena
Bioinformatics 2002 ; 18 Suppl 1()S128-35.
Score: 0.610
Database resources of the National Center for Biotechnology Information.
D L Wheeler ... B A Rapp
Nucleic Acids Res 2001 Jan; 29(1)11-6.
Score: 0.603
Dual-genome primer design for construction of DNA microarrays.
Anders Andersson ... Peter Nilsson
Bioinformatics 2005 Feb; 21(3)325-32.
Score: 0.595
Database resources of the National Center for Biotechnology Information: update.
David L Wheeler ... Lukas Wagner
Nucleic Acids Res 2004 Jan; 32(Database issue)D35-40.
Score: 0.591
GenoFrag: software to design primers optimized for whole genome scanning by long-range PCR amplification.
Nouri Ben Zakour ... Yves Le Loir
Nucleic Acids Res 2004 ; 32(1)17-24.
Score: 0.586
Multilocus markers for mouse genome analysis: PCR amplification based on single primers of arbitrary nucleotide sequence.
J H Nadeau ... B Paigen
Mamm Genome 1992 ; 3(2)55-64.
Score: 0.581
PUNS: transcriptomic- and genomic-in silico PCR for enhanced primer design.
Paul C Boutros ... Allan B Okey
Bioinformatics 2004 Oct; 20(15)2399-400.
Score: 0.578
NCBI's LocusLink and RefSeq.
D R Maglott ... K D Pruitt
Nucleic Acids Res 2000 Jan; 28(1)126-8.
Score: 0.578
Biologically-generated primer for PCR: PCR primer of unknown sequence.
C Bindon ... C Mitchell
Nucleic Acids Res 1998 Jul; 26(13)3305-8.
Score: 0.577
Database resources of the National Center for Biotechnology Information: 2002 update.
David L Wheeler ... Barbara A Rapp
Nucleic Acids Res 2002 Jan; 30(1)13-6.
Score: 0.573
Primer Master: a new program for the design and analysis of PCR primers.
V Proutski ... E C Holmes
Comput Appl Biosci 1996 Jun; 12(3)253-5.
Score: 0.560
AcePrimer: automation of PCR primer design based on gene structure.
Sheldon J McKay ... Steven J M Jones
Bioinformatics 2002 Nov; 18(11)1538-9.
Score: 0.560
A PCR primer bank for quantitative gene expression analysis.
Xiaowei Wang ... Brian Seed
Nucleic Acids Res 2003 Dec; 31(24)e154.
Score: 0.559
OSP: a computer program for choosing PCR and DNA sequencing primers.
L Hillier ... P Green
PCR Methods Appl 1991 Nov; 1(2)124-8.
Score: 0.555
ExPrimer: to design primers from exon--exon junctions.
Kuljeet S Sandhu ... Kshitish K Acharya
Bioinformatics 2005 May; 21(9)2091-2.
Score: 0.552
ELXR: a resource for rapid exon-directed sequence analysis.
Jeoffrey J Schageman ... Alexander Pertsemlidis
Genome Biol 2004 ; 5(5)R36.
Score: 0.545
Selection of primers for polymerase chain reaction.
W Rychlik
Mol Biotechnol 1995 Apr; 3(2)129-34.
Score: 0.543
Database resources of the National Center for Biotechnology Information.
David L Wheeler ... Eugene Yaschenko
Nucleic Acids Res 2005 Jan; 33(Database issue)D39-45.
Score: 0.543
PCR primers for the amplification of four insect mitochondrial gene fragments.
S Kambhampati ... P T Smith
Insect Mol Biol 1995 Nov; 4(4)233-6.
Score: 0.535
Polymerase chain reaction amplification of the genome of infectious bronchitis virus.
J R Andreasen ... D A Hilt
Avian Dis 1991 Jan-Mar; 35(1)216-20.
Score: 0.532
Complete genomes in WWW Entrez: data representation and analysis.
T A Tatusova ... J A Ostell
Bioinformatics 1999 Jul-Aug; 15(7-8)536-43.
Score: 0.531
Database resources of the National Center for Biotechnology.
David L Wheeler ... Lukas Wagner
Nucleic Acids Res 2003 Jan; 31(1)28-33.
Score: 0.530
Polymerase chain reaction with additional primers allows identification of amplified DNA and recognition of specific alleles.
U Candrian ... J Lüthy
Mol Cell Probes 1992 Feb; 6(1)13-9.
Score: 0.530
K-tuple frequency in the human genome and polymerase chain reaction.
R Griffais ... M Thibon
Nucleic Acids Res 1991 Jul; 19(14)3887-91.
Score: 0.524
Database resources of the National Center for Biotechnology Information.
David L Wheeler ... Eugene Yaschenko
Nucleic Acids Res 2006 Jan; 34(Database issue)D173-80.
Score: 0.524
Design of endonuclease restriction sites into primers for PCR cloning.
Jianghui Hou
Bioinformatics 2002 Dec; 18(12)1690-1.
Score: 0.522
Organelle genome resource at NCBI.
T G Wolfsberg ... T A Tatusov
Trends Biochem Sci 2001 Mar; 26(3)199-203.
Score: 0.520
Design considerations and effects of LNA in PCR primers.
David Latorra ... J Michael Hurley
Mol Cell Probes 2003 Oct; 17(5)253-9.
Score: 0.519
GenBank.
Dennis A Benson ... David L Wheeler
Nucleic Acids Res 2005 Jan; 33(Database issue)D34-8.
Score: 0.519
Utility of comparative anchor-tagged sequences as physical anchors for comparative genome analysis among the Culicidae.
Eric W Chambers ... David W Severson
Am J Trop Med Hyg 2003 Jul; 69(1)98-104.
Score: 0.515
Multiplex PCR design strategy used for the simultaneous amplification of 10 Y chromosome short tandem repeat (STR) loci.
Richard Schoske ... John M Butler
Anal Bioanal Chem 2003 Feb; 375(3)333-43.
Score: 0.512
BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences.
T A Tatusova ... T L Madden
FEMS Microbiol Lett 1999 May; 174(2)247-50.
Score: 0.511
Genome size and microsatellites: the effect of nuclear size on amplification potential.
Trenton W J Garner
Genome 2002 Feb; 45(1)212-5.
Score: 0.506
GenBank.
D A Benson ... D L Wheeler
Nucleic Acids Res 2000 Jan; 28(1)15-8.
Score: 0.505
DePIE: Designing Primers for Protein Interaction Experiments.
Guoqing Lu ... David Thomas
Nucleic Acids Res 2003 Jul; 31(13)3755-7.
Score: 0.503
Plant genome resources at the national center for biotechnology information.
David L Wheeler ... James Ostell
Plant Physiol 2005 Jul; 138(3)1280-8.
Score: 0.503
Detection of novel RNA viruses: morbilliviruses as a model system.
H Shimizu ... J C Burns
Mol Cell Probes 1994 Jun; 8(3)209-14.
Score: 0.502
Selection for 3' end triplets for polymerase chain reaction primers.
Kenji Onodera ... Ulrich Melcher
Mol Cell Probes 2004 Dec; 18(6)369-72.
Score: 0.499
Technical report: Part 2. Basic requirements for designing optimal PCR primers.
M Mitsuhashi
J Clin Lab Anal 1996 ; 10(5)285-93.
Score: 0.496
GenBank.
Dennis A Benson ... David L Wheeler
Nucleic Acids Res 2006 Jan; 34(Database issue)D16-20.
Score: 0.495
GenBank.
Dennis A Benson ... David L Wheeler
Nucleic Acids Res 2002 Jan; 30(1)17-20.
Score: 0.494
CDD: a Conserved Domain Database for protein classification.
Aron Marchler-Bauer ... Stephen H Bryant
Nucleic Acids Res 2005 Jan; 33(Database issue)D192-6.
Score: 0.494
CDD: a database of conserved domain alignments with links to domain three-dimensional structure.
Aron Marchler-Bauer ... Stephen H Bryant
Nucleic Acids Res 2002 Jan; 30(1)281-3.
Score: 0.494
Tracing cancer pathogene.
T Kutuzova
Indian J Cancer 1973 Jun; 10(2)259-60.
Score: 0.492
GenBank.
D A Benson ... B F Ouellette
Nucleic Acids Res 1998 Jan; 26(1)1-7.
Score: 0.490
PCR-generated artefact from 16S rRNA gene-specific primers.
Catherine A Osborne ... Peter H Janssen
FEMS Microbiol Lett 2005 Jul; 248(2)183-7.
Score: 0.490
[A reverse transcriptase-polymerase chain reaction method improving the specific amplification of caveolin-1 gene sequences]
Yang-yan Xu ... Jian Tu
Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2006 Feb; 23(1)59-62.
Score: 0.489
GenBank: update.
Dennis A Benson ... David L Wheeler
Nucleic Acids Res 2004 Jan; 32(Database issue)D23-6.
Score: 0.487
GenBank.
Dennis A Benson ... David L Wheeler
Nucleic Acids Res 2003 Jan; 31(1)23-7.
Score: 0.486
Selective amplification of cDNA sequence from total RNA by cassette-ligation mediated polymerase chain reaction (PCR): application to sequencing 6.5 kb genome segment of hantavirus strain B-1.
Y Isegawa ... S Ueda
Mol Cell Probes 1992 Dec; 6(6)467-75.
Score: 0.486
G-PRIMER: greedy algorithm for selecting minimal primer set.
Jiren Wang ... Wing-Kin Sung
Bioinformatics 2004 Oct; 20(15)2473-5.
Score: 0.486
Gene-specific universal mammalian sequence-tagged sites: application to the canine genome.
P J Venta ... G J Brewer
Biochem Genet 1996 Aug; 34(7-8)321-41.
Score: 0.486
Differentiation of Trichinella genotypes by polymerase chain reaction using sequence-specific primers.
G D Appleyard ... A A Gajadhar
J Parasitol 1999 Jun; 85(3)556-9.
Score: 0.486
CODEHOP (COnsensus-DEgenerate Hybrid Oligonucleotide Primer) PCR primer design.
Timothy M Rose ... Steven Henikoff
Nucleic Acids Res 2003 Jul; 31(13)3763-6.
Score: 0.485
Multiplex quantitative PCR using self-quenched primers labeled with a single fluorophore.
Irina Nazarenko ... Ayoub Rashtchian
Nucleic Acids Res 2002 May; 30(9)e37.
Score: 0.485
PCR primers for human chromosomes: reagents for the rapid analysis of somatic cell hybrids.
S Theune ... S L Naylor
Genomics 1991 Mar; 9(3)511-6.
Score: 0.484
The sequence heterogenicities among 16S rRNA genes of Salmonella serovars and the effects on the specificity of the primers designed.
Chien-Ku Lin ... Hau-Yang Tsen
Int J Food Microbiol 2004 Nov; 96(2)205-14.
Score: 0.482
Three-step PCR mutagenesis for 'linker scanning'.
X M Li ... L J Shapiro
Nucleic Acids Res 1993 Aug; 21(16)3745-8.
Score: 0.480
A novel PCR technique using Alu-specific primers to identify unknown flanking sequences from the human genome.
M Minami ... P Paterlini
Genomics 1995 Sep; 29(2)403-8.
Score: 0.479
Directional genome walking using PCR.
R N Mishra ... M K Reddy
Biotechniques 2002 Oct; 33(4)830-2, 834.
Score: 0.478
Specific primer for AP-PCR identification of Actinobacillus actinomycetemcomitans.
M J Avila-Campos ... L W Mayer
J Clin Periodontol 1999 Nov; 26(11)699-704.
Score: 0.478
Design of degenerate primers for multiplex nested-PCR detection of human lymphotropic herpesviruses.
Vanida Nopponpunth ... Yong Poovorawan
Southeast Asian J Trop Med Public Health 2003 Mar; 34(1)120-5.
Score: 0.477
SOP3v2: web-based selection of oligonucleotide primer trios for genotyping of human and mouse polymorphisms.
Steven Ringquist ... Massimo Trucco
Nucleic Acids Res 2005 Jul; 33(Web Server issue)W548-52.
Score: 0.477
GENOMEMASKER package for designing unique genomic PCR primers.
Reidar Andreson ... Maido Remm
BMC Bioinformatics 2006 ; 7()172.
Score: 0.476
A PCR-based strategy for rapid mapping of hepadnavirus integrated sequences in hepatocellular carcinomas.
R Bruni ... M Rapicetta
J Virol Methods 1995 Apr; 52(3)347-60.
Score: 0.475
Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction.
R S Lanciotti ... A V Vorndam
J Clin Microbiol 1992 Mar; 30(3)545-51.
Score: 0.475
Connecting sequence and biology in the laboratory mouse.
Richard M Baldarelli ... Carol J Bult
Genome Res 2003 Jun; 13(6B)1505-19.
Score: 0.475
MethPrimer: designing primers for methylation PCRs.
Long-Cheng Li ... Rajvir Dahiya
Bioinformatics 2002 Nov; 18(11)1427-31.
Score: 0.474
Characterization of primers for optimal amplification of hepatitis B virus DNA in the polymerase chain reaction assay.
S Kaneko ... R H Miller
J Virol Methods 1990 Aug; 29(2)225-9.
Score: 0.473
PerlPrimer: cross-platform, graphical primer design for standard, bisulphite and real-time PCR.
Owen J Marshall
Bioinformatics 2004 Oct; 20(15)2471-2.
Score: 0.473
Sequence variation in primer targets affects the accuracy of viral quantitative PCR.
David M Whiley ... Theo P Sloots
J Clin Virol 2005 Oct; 34(2)104-7.
Score: 0.472
Identification of putative sequence specific PCR primers for detection of the toxigenic fungal species Stachybotrys chartarum.
R A Haugland ... J L Heckman
Mol Cell Probes 1998 Dec; 12(6)387-96.
Score: 0.472
RNA-primed PCR.
H Shibata ... K Hayashi
Genome Res 1995 Nov; 5(4)400-3.
Score: 0.472
An empirical method for the estimation of nonspecific PCR primer derived genomic reactivity.
M W Carmody ... C P Vary
Biotechniques 1994 Jun; 16(6)1044, 1047-50.
Score: 0.471
GeneOrder: comparing the order of genes in small genomes.
R Mazumder ... D Seto
Bioinformatics 2001 Feb; 17(2)162-6.
Score: 0.471
A novel strategy to design highly specific PCR primers based on the stability and uniqueness of 3'-end subsequences.
Fumihito Miura ... Takashi Ito
Bioinformatics 2005 Dec; 21(24)4363-70.
Score: 0.470
Simultaneous TD/RT-PCR detection of cymbidium mosaic potexvirus and odontoglossum ringspot tobamovirus with a single pair of primers.
M L Seoh ... L Zhang
J Virol Methods 1998 Jun; 72(2)197-204.
Score: 0.469
Detection of Goose parvovirus genome by polymerase chain reaction: distribution of Goose parvovirus in Muscovy ducklings.
C K Limn ... K Takehara
Virus Res 1996 Jun; 42(1-2)167-72.
Score: 0.469
Testing of a whole genome PCR scanning approach to identify genomic variability in four different species of lactic acid bacteria.
Nouri Ben Zakour ... Yves Le Loir
Res Microbiol 2006 May; 157(4)386-94.
Score: 0.468
Optimal conditions for detection of human immunodeficiency virus type 1 DNA by polymerase chain reaction with nested primers.
M Zazzi ... P E Valensin
Mol Cell Probes 1993 Dec; 7(6)431-7.
Score: 0.467
NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins.
Kim D Pruitt ... Donna R Maglott
Nucleic Acids Res 2005 Jan; 33(Database issue)D501-4.
Score: 0.467
PCR primers and amplification methods for 12S ribosomal DNA, the control region, cytochrome oxidase I, and cytochrome b in bufonids and other frogs, and an overview of PCR primers which have amplified DNA in amphibians successfully.
A M Goebel ... M E Atz
Mol Phylogenet Evol 1999 Feb; 11(1)163-99.
Score: 0.467
Extended fitness of variable region primers by a novel PCR protocol.
F Lan ... K Inoue
J Immunol Methods 1996 Sep; 195(1-2)27-32.
Score: 0.465
Amplification of GB virus-C/hepatitis G virus RNA with primers from different regions of the viral genome.
J H Kao ... D S Chen
J Med Virol 1997 Apr; 51(4)284-9.
Score: 0.465
Simple sequence repeat marker loci discovery using SSR primer.
Andrew J Robinson ... David Edwards
Bioinformatics 2004 Jun; 20(9)1475-6.
Score: 0.465
Entrez Gene: gene-centered information at NCBI.
Donna Maglott ... Tatiana Tatusova
Nucleic Acids Res 2005 Jan; 33(Database issue)D54-8.
Score: 0.465
GBV-RNA detection by polymerase chain reaction with several primer pairs.
E Quirós ... C Maroto
Microbios 1998 ; 95(381)125-30.
Score: 0.464
[Polymerase chain reaction in hepatitis C: increased sensitivity via amplification of shorter cDNA fragments]
S Schwery ... H Bühler
Schweiz Med Wochenschr 1993 May; 123(19)965-9.
Score: 0.464
PCR primer design.
David L Hyndman ... Masato Mitsuhashi
Methods Mol Biol 2003 ; 226()81-8.
Score: 0.463
Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes.
N L Glass ... G C Donaldson
Appl Environ Microbiol 1995 Apr; 61(4)1323-30.
Score: 0.462
Amplification of human genomic DNA sequences with polymerase chain reaction using a single oligonucleotide primer.
L Luo ... E P Diamandis
J Clin Lab Anal 1999 ; 13(2)69-74.
Score: 0.462
[The demonstration of the genes controlling enterotoxigenicity in Staphylococcus aureus strains by using the polymerase chain reaction]
V V Grabovetskiĭ ... V I Kiselev
Zh Mikrobiol Epidemiol Immunobiol 1995 Jan-Feb; (1)75-8.
Score: 0.462
Applications of the polymerase chain reaction to genome analysis.
E A Rose
FASEB J 1991 Jan; 5(1)46-54.
Score: 0.462
Development of a versatile cassette for directional genome walking using cassette ligation-mediated PCR and its application in the cloning of complete lipolytic genes from Bacillus species.
Mulalo B Nthangeni ... Derek Litthauer
J Microbiol Methods 2005 May; 61(2)225-34.
Score: 0.462
The degenerate primer design problem.
Chaim Linhart ... Ron Shamir
Bioinformatics 2002 ; 18 Suppl 1()S172-81.
Score: 0.462
Optimisation of PCR reactions using primer chessboarding.
Rory Gunson ... William F Carman
J Clin Virol 2003 Apr; 26(3)369-73.
Score: 0.461
Design and analysis of PCR primers for the amplification and cloning of human immunoglobulin Fab fragments.
M de Boer ... H C Wong
Hum Antibodies Hybridomas 1994 ; 5(1-2)57-64.
Score: 0.461
Site-directed mutagenesis by double polymerase chain reaction.
S Barik
Mol Biotechnol 1995 Feb; 3(1)1-7.
Score: 0.460
An automatic modified polymerase chain reaction procedure for hepatitis B virus DNA detection.
D Larzul ... J L Guesdon
J Virol Methods 1990 Jan; 27(1)49-60.
Score: 0.460
Rapid amplification of genomic ends (RAGE) as a simple method to clone flanking genomic DNA.
R S Cormack ... I E Somssich
Gene 1997 Jul; 194(2)273-6.
Score: 0.460
Construction of an internal standard for semiquantitative polymerase chain reaction analysis of heat shock proteins.
M A Khan ... M J Dunn
Electrophoresis 1996 Jan; 17(1)40-3.
Score: 0.459
Potential bias of fungal 18S rDNA and internal transcribed spacer polymerase chain reaction primers for estimating fungal biodiversity in soil.
Ian C Anderson ... James I Prosser
Environ Microbiol 2003 Jan; 5(1)36-47.
Score: 0.458
Genomic fingerprints produced by PCR with consensus tRNA gene primers.
J Welsh ... M McClelland
Nucleic Acids Res 1991 Feb; 19(4)861-6.
Score: 0.457
Partial inhibition of amplifications by primers of EHEC genes.
I Gadó ... H Milch
Acta Microbiol Immunol Hung 1998 ; 45(2)239-52.
Score: 0.456
Sequence analysis of DNA randomly amplified from the Saccharomyces cerevisiae genome.
A McGrath ... T V McCarthy
Mol Cell Probes 1998 Dec; 12(6)397-405.
Score: 0.456
OMIA (Online Mendelian Inheritance in Animals): an enhanced platform and integration into the Entrez search interface at NCBI.
Johann Lenffer ... Shoba Ranganathan
Nucleic Acids Res 2006 Jan; 34(Database issue)D599-601.
Score: 0.455
Efficient high-throughput resequencing of genomic DNA.
Raymond D Miller ... Pui-Yan Kwok
Genome Res 2003 Apr; 13(4)717-20.
Score: 0.455
A simplified procedure for developing multiplex PCRs.
A P Shuber ... K W Klinger
Genome Res 1995 Dec; 5(5)488-93.
Score: 0.455
An automated comparative analysis of 17 complete microbial genomes.
A K Bansal
Bioinformatics 1999 Nov; 15(11)900-8.
Score: 0.455
A definitive set of oligonucleotide primers for amplifying human V regions.
D Sblattero ... A Bradbury
Immunotechnology 1998 Jan; 3(4)271-8.
Score: 0.453
Polymerase chain reaction (PCR) amplification with a single specific primer.
M Kalman ... M Cashel
Biochem Biophys Res Commun 1990 Mar; 167(2)504-6.
Score: 0.452
Nucleotide sequence that binds primer for DNA synthesis to the avian sarcoma virus genome.
B Cordell ... H M Goodman
J Virol 1976 Aug; 19(2)548-58.
Score: 0.452
Cloning of an expressed sequence tag with restriction display polymerase chain reaction.
Bao Zhang ... Wen-Ling Zheng
Di Yi Jun Yi Da Xue Xue Bao 2002 Apr; 22(4)309-11.
Score: 0.451
An abnormally long HIV-1 env DNA PCR product due to altered sequences of primer binding sites.
Y S Boriskin ... J C Booth
New Microbiol 1999 Jan; 22(1)59-62.
Score: 0.451
GenBank.
D A Benson ... D L Wheeler
Nucleic Acids Res 1999 Jan; 27(1)12-7.
Score: 0.451
Nitrous oxide reductase (nosZ) gene-specific PCR primers for detection of denitrifiers and three nosZ genes from marine sediments.
D J Scala ... L J Kerkhof
FEMS Microbiol Lett 1998 May; 162(1)61-8.
Score: 0.450
Linkage analysis with multiplexed short tandem repeat polymorphisms using infrared fluorescence and M13 tailed primers.
W S Oetting ... R A King
Genomics 1995 Dec; 30(3)450-8.
Score: 0.450
Identification of Mycobacterium intracellulare by a polymerase chain reaction using species-specific primers.
T Yamazaki ... R M Nakamura
Tuber Lung Dis 1995 Aug; 76(4)330-5.
Score: 0.450
Identification of conserved nucleotide sequences within the GB virus C 5'-untranslated region: design of PCR primers for detection of viral RNA.
A S Muerhoff ... I K Mushahwar
J Virol Methods 1996 Oct; 62(1)55-62.
Score: 0.449
Specific DNA amplification utilizing the polymerase chain reaction and random oligonucleotide primers: application to the analysis of antigen receptor variable regions.
W V Williams ... D B Weiner
DNA Cell Biol 1992 Nov; 11(9)707-20.
Score: 0.449
RefSeq and LocusLink: NCBI gene-centered resources.
K D Pruitt ... D R Maglott
Nucleic Acids Res 2001 Jan; 29(1)137-40.
Score: 0.449
CDD: a curated Entrez database of conserved domain alignments.
Aron Marchler-Bauer ... Stephen H Bryant
Nucleic Acids Res 2003 Jan; 31(1)383-7.
Score: 0.449
The degenerate primer design problem: theory and applications.
Chaim Linhart ... Ron Shamir
J Comput Biol 2005 May; 12(4)431-56.
Score: 0.448
Evaluation of PCR primers for denaturing gradient gel electrophoresis analysis of fungal communities in compost.
M N Marshall ... J S VanderGheynst
J Appl Microbiol 2003 ; 95(5)934-48.
Score: 0.448
GST-PRIME: a genome-wide primer design software for the generation of gene sequence tags.
C Varotto ... D Leister
Nucleic Acids Res 2001 Nov; 29(21)4373-7.
Score: 0.448
Design of a unique PCR primer for detection of oral HPV infection.
T Kuroki ... M Makimura
J Oral Sci 2000 Dec; 42(4)189-93.
Score: 0.447
A sensitive method for the detection of enterotoxigenic Escherichia coli by the polymerase chain reaction using multiple primer pairs.
A Abe ... H Danbara
Zentralbl Bakteriol 1992 Jul; 277(2)170-8.
Score: 0.446
Utility of chicken-specific microsatellite primers for mapping the turkey genome.
K M Reed ... C W Beattie
Anim Biotechnol 1999 ; 10(3)137-41.
Score: 0.446
One-step PCR amplification of complete arthropod mitochondrial genomes.
U W Hwang ... W Kim
Mol Phylogenet Evol 2001 Jun; 19(3)345-52.
Score: 0.446
GeneFisher--software support for the detection of postulated genes.
R Giegerich ... C Schleiermacher
Proc Int Conf Intell Syst Mol Biol 1996 ; 4()68-77.
Score: 0.446
DNA sequencing by a subcloning-walking strategy using a specific and semi-random primer in the polymerase chain reaction.
P Verhasselt ... G Volckaert
DNA Seq 1992 ; 2(5)281-7.
Score: 0.445
Polymerase chain reaction (PCR) primers for the amplification of five nuclear introns in vertebrates.
V L Friesen ... T P Birt
Mol Ecol 1999 Dec; 8(12)2147-9.
Score: 0.445
[In vitro amplification of genome fragments of the mucosal disease virus (BVD-MD) using the PCR method]
S Vilcek
Vet Med (Praha) 1993 ; 38(5)257-66.
Score: 0.445
Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression.
Silvia Rüberg ... Anke Becker
J Biotechnol 2003 Dec; 106(2-3)255-68.
Score: 0.445
16 S rDNA primers and the unbiased assessment of thermophile diversity.
G C Baker ... D A Cowan
Biochem Soc Trans 2004 Apr; 32(Pt 2)218-21.
Score: 0.444
Multiplex allele-specific target amplification based on PCR suppression.
N E Broude ... C R Cantor
Proc Natl Acad Sci U S A 2001 Jan; 98(1)206-11.
Score: 0.444
Ketosynthase domain probes identify two subclasses of fungal polyketide synthase genes.
L E Bingle ... C M Lazarus
Fungal Genet Biol 1999 Apr; 26(3)209-23.
Score: 0.444
Characteristics of selective polymerase chain reaction (PCR) using two-base anchored primers and improvement of its specificity.
K Okano ... H Kambara
Electrophoresis 1998 Dec; 19(18)3071-8.
Score: 0.444
Use of family specific leader region primers for PCR amplification of the human heavy chain variable region gene repertoire.
M J Campbell ... R Levy
Mol Immunol 1992 Feb; 29(2)193-203.
Score: 0.444
Genome walking by single-specific-primer polymerase chain reaction: SSP-PCR.
V Shyamala ... G F Ames
Gene 1989 Dec; 84(1)1-8.
Score: 0.443
Primaclade--a flexible tool to find conserved PCR primers across multiple species.
Michael D Gadberry ... Elizabeth A Kellogg
Bioinformatics 2005 Apr; 21(7)1263-4.
Score: 0.443
Primer Design Assistant (PDA): A web-based primer design tool.
S H Chen ... C A Hsiung
Nucleic Acids Res 2003 Jul; 31(13)3751-4.
Score: 0.443
Evaluation of human papillomavirus-consensus primers for HPV detection by the polymerase chain reaction.
D G Harnish ... T E Rohan
Mol Cell Probes 1999 Feb; 13(1)9-21.
Score: 0.443
Olga--oligonucleotide primer design program for the Atari ST.
C G Bridges
Comput Appl Biosci 1990 Apr; 6(2)124-5.
Score: 0.443
Detection of hepatitis C virus RNA by a two-stage polymerase chain reaction with two pairs of primers deduced from the 5'-noncoding region.
H Okamoto ... Y Miyakawa
Jpn J Exp Med 1990 Aug; 60(4)215-22.
Score: 0.443
The polymerase chain reaction with sequence specific primers for the detection of the factor V mutation associated with activated protein C resistance.
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[Development of EST (Expressed Sequence Tags) Marker in Chinese Cabbage and its Transferability to Repeseed.]
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Rapid amplification of cDNA ends (RACE) improves the PCR-based isolation of immunoglobulin variable region genes from murine and human lymphoma cells and cell lines.
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Identification of root rot fungi in nursery seedlings by nested multiplex PCR.
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Appl Environ Microbiol 1996 Nov; 62(11)4026-31.
Score: 0.439
Comparison of three PCR primer sets for diagnosis of septicemic melioidosis.
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Score: 0.438
Multiple primer pairs for polymerase chain reaction (PCR) amplification of human parvovirus B19 DNA.
E L Durigon ... L J Anderson
J Virol Methods 1993 Oct; 44(2-3)155-65.
Score: 0.438
Dual asymmetric PCR: one-step construction of synthetic genes.
G S Sandhu ... B C Kline
Biotechniques 1992 Jan; 12(1)14-6.
Score: 0.438
The construction and use of a PCR internal control.
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Mol Cell Probes 1998 Oct; 12(5)259-62.
Score: 0.438
Frankia genus-specific characterization by polymerase chain reaction.
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Appl Environ Microbiol 1991 Nov; 57(11)3278-86.
Score: 0.437
SOP3: a web-based tool for selection of oligonucleotide primers for single nucleotide polymorphism analysis by Pyrosequencing.
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Biotechniques 2005 Jan; 38(1)87-94.
Score: 0.437
Rapid isolation of flanking genomic DNA using biotin-RAGE, a variation of single-sided polymerase chain reaction.
B T Bloomquist ... R E Mains
DNA Cell Biol 1992 Dec; 11(10)791-7.
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Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies.
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Nucleic Acids Res 2005 Jul; 33(Web Server issue)W560-6.
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The PCR primers database.
B Shomer
DNA Seq 1996 ; 6(4)255-6.
Score: 0.436
Canine and bovine ras family expression detected and discriminated by use of polymerase chain reaction.
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Anticancer Res 1989 Nov-Dec; 9(6)1743-9.
Score: 0.435
Evaluation of primers and PCR conditions for the analysis of 16S rRNA genes from a natural environment.
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FEMS Microbiol Lett 2003 Apr; 221(2)299-304.
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NCBI Reference Sequence project: update and current status.
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Nucleic Acids Res 2003 Jan; 31(1)34-7.
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Single-tube two-round polymerase chain reaction using the LightCycler instrument.
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Degradable dUMP outer primers in merged tandem (M/T)-nested PCR: low- and single-copy DNA target amplification.
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Anal Biochem 1998 Oct; 263(1)85-92.
Score: 0.434
Detection of Methylobacterium species by 16S rRNA gene-targeted PCR.
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Appl Environ Microbiol 1997 Apr; 63(4)1594-7.
Score: 0.434
Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences.
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Nucleic Acids Res 1998 Apr; 26(7)1628-35.
Score: 0.433
WindowMasker: window-based masker for sequenced genomes.
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New universal primers facilitate Pyrosequencing.
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Electrophoresis 2006 Feb; 27(2)394-7.
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An extended primer set for PCR amplification of murine kappa variable regions.
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Biotechniques 1993 Aug; 15(2)286-92.
Score: 0.433
An introduction to PCR primer design and optimization of amplification reactions.
J M Robertson ... J Walsh-Weller
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Score: 0.433
Random PCR-based genome sequencing: a non-divide-and-conquer strategy.
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Score: 0.432
RNA: a method to specifically inhibit PCR amplification of known members of a multigene family by degenerate primers.
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Nucleic Acids Res 2001 Mar; 29(6)E31.
Score: 0.432
[Use PCR synthesis large fragment DNA.]
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Score: 0.432
Universal primers for real-time amplification of DNA from all known Orthohepadnavirus species.
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Specific PCR primers for Cryptosporidium parvum with extra high sensitivity.
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Mol Cell Probes 2000 Feb; 14(1)33-9.
Score: 0.432
Restriction-site PCR: a direct method of unknown sequence retrieval adjacent to a known locus by using universal primers.
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PCR Methods Appl 1993 May; 2(4)318-22.
Score: 0.431
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Bull Med Libr Assoc 1993 Jul; 81(3)282-4.
Score: 0.431
Optimization strategies for the polymerase chain reaction.
J F Williams
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Score: 0.431
Apolipoprotein B(Arg3500----Gln) allele specific polymerase chain reaction: large-scale screening of pooled blood samples.
V Ruzicka ... W Gross
J Lipid Res 1992 Oct; 33(10)1563-7.
Score: 0.431
Detection of human immunodeficiency virus type 1 DNA by polymerase chain reaction amplification and capture hybridization in microtiter wells.
G H Keller ... M M Manak
J Clin Microbiol 1991 Mar; 29(3)638-41.
Score: 0.430
Oligonucleotides as short as 7-mers can be used for PCR amplification.
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DNA Cell Biol 1994 Jan; 13(1)75-82.
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A novel technique for detecting single nucleotide polymorphisms by analyzing consumed allele-specific primers.
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Electrophoresis 2001 Feb; 22(3)418-20.
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Microsequencing of myosins for PCR primer design.
E L Bearer
Methods Mol Biol 2001 ; 161()9-15.
Score: 0.429
Screening of the closterovirus genome by degenerate primer-mediated polymerase chain reaction.
A V Karasev ... S M Garnsey
J Gen Virol 1994 Jun; 75 ( Pt 6)()1415-22.
Score: 0.429
Mapping maize microsatellites and polymerase chain reaction confirmation of the targeted repeats using a CT primer.
M L Senior ... M Heun
Genome 1993 Oct; 36(5)884-9.
Score: 0.429
Phylum- and class-specific PCR primers for general microbial community analysis.
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Appl Environ Microbiol 2005 Oct; 71(10)6193-8.
Score: 0.428
A rapid method to determine the orientation of blunt end ligated polymerase chain reaction products.
S Dooley ... C Welter
Electrophoresis 1993 Jul; 14(7)662-3.
Score: 0.428
Phytoplasma-specific PCR primers based on sequences of the 16S-23S rRNA spacer region.
C D Smart ... B C Kirkpatrick
Appl Environ Microbiol 1996 Aug; 62(8)2988-93.
Score: 0.428
DNA analysis with multiplex microarray-enhanced PCR.
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Nucleic Acids Res 2005 ; 33(2)e11.
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[Development of SSR markers in Litchi( Litchi chinensis)]
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Yi Chuan 2004 Nov; 26(6)911-6.
Score: 0.427
Design of primers for PCR amplification of highly variable genomes.
J Dopazo ... F Sobrino
Comput Appl Biosci 1993 Apr; 9(2)123-5.
Score: 0.427
A new primer pair for detection of Chlamydia pneumoniae by polymerase chain reaction.
Y Kubota
Microbiol Immunol 1996 ; 40(1)27-32.
Score: 0.427
Semi-quantitative real-time PCR for pain research.
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[The use of DNA polymerase from Thermus thermophilus]
A N Kuz'min ... V G Morozov
Vopr Virusol 1992 Mar-Apr; 37(2)94-5.
Score: 0.426
SNPsFinder--a web-based application for genome-wide discovery of single nucleotide polymorphisms in microbial genomes.
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[Research progress of methods of SSR primers development.]
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Yi Chuan 2004 Sep; 26(5)769-76.
Score: 0.426
Tuning single nucleotide discrimination in polymerase chain reactions (PCRs): synthesis of primer probes bearing polar 4'-C-modifications and their application in allele-specific PCR.
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Chemistry 2005 Mar; 11(6)1861-70.
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Detection of hepatitis C virus genome in human serum by multi-targeted polymerase chain reaction.
M Okamoto ... S Shigeta
J Med Virol 1993 Sep; 41(1)6-10.
Score: 0.424
A multicenter international evaluation of single-tube amplification protocols for sequencing-based typing of HLA-DRB1 and HLA-DRB3,4,5.
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Tissue Antigens 2004 May; 63(5)412-23.
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Whole genome amplification of single cells: mathematical analysis of PEP and tagged PCR.
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Nucleic Acids Res 1995 Aug; 23(15)3034-40.
Score: 0.424
Search for Coxsackievirus B3 RNA in idiopathic dilated cardiomyopathy using gene amplification by polymerase chain reaction.
M Grasso ... G Milanesi
Am J Cardiol 1992 Mar; 69(6)658-64.
Score: 0.424
Rapid identification of yeast species using three primers in a polymerase chain reaction.
J W Fell
Mol Mar Biol Biotechnol 1993 Jun; 2(3)174-80.
Score: 0.424
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Score: 0.423
t(8;21) detection by RT-PCR: an improved primer set convenient for the routine laboratory.
C Lynas ... M Wagstaff
Br J Haematol 1995 Dec; 91(4)924-6.
Score: 0.423
A general method for nested RT-PCR amplification and sequencing the complete HCV genotype 1 open reading frame.
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The effect of temperature and oligonucleotide primer length on the specificity and efficiency of amplification by the polymerase chain reaction.
D Y Wu ... R B Wallace
DNA Cell Biol 1991 Apr; 10(3)233-8.
Score: 0.422
Identification of genetically modified potato (Solanum tuberosum) cultivars using event specific polymerase chain reaction.
Marie-José Côté ... Cheryl Dollard
J Agric Food Chem 2005 Aug; 53(17)6691-6.
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[The use of the polymerase chain reaction in analyzing ancient DNAs (exemplified by that of the Enmynveem mammoth)]
B A Maliarchuk ... L L Solovenchuk
Izv Akad Nauk Ser Biol 1996 Nov-Dec; (6)681-6.
Score: 0.421
Use of degenerate primers and touchdown PCR to amplify a halogenase gene fragment from Streptomyces venezuelae ISP5230.
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J Ind Microbiol Biotechnol 2002 Jul; 29(1)1-5.
Score: 0.421
Genetic basis of enterobacterial repetitive intergenic consensus (ERIC)-PCR fingerprint pattern in Sinorhizobium meliloti and identification of S. meliloti employing PCR primers derived from an ERIC-PCR fragment.
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Arch Microbiol 1999 Jul; 172(1)22-30.
Score: 0.421
The sequencing-based typing tool of dbMHC: typing highly polymorphic gene sequences.
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Nucleic Acids Res 2004 Jul; 32(Web Server issue)W173-5.
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Typing of Y chromosome SNPs with multiplex PCR methods.
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Oligonucleotide primers for PCR amplification of coelomate introns.
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Adapting the polymerase chain reaction to a double-stranded RNA genome.
V S Davis ... J A Boyle
Anal Biochem 1990 Aug; 189(1)30-4.
Score: 0.420
Differential amplification of rRNA genes by polymerase chain reaction.
A L Reysenbach ... N R Pace
Appl Environ Microbiol 1992 Oct; 58(10)3417-8.
Score: 0.420
Development of a genus specific primer set for detection of Leishmania parasites by polymerase chain reaction.
R Bhattacharyya ... H K Majumder
FEMS Microbiol Lett 1996 Jan; 135(2-3)195-200.
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[A novel quantitative PCR with fluorogenic probe]
K Isono
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Score: 0.420
Detection of verotoxin-producing Escherichia coli O157:H7 by multiplex polymerase chain reaction.
I Nagano ... Y Takahashi
Microbiol Immunol 1998 ; 42(5)371-6.
Score: 0.419
Two step single primer mediated polymerase chain reaction. Application to cloning of putative mouse, beta-galactoside alpha 2,6-sialyltransferase cDNA.
T Hamamoto ... S Tsuji
Bioorg Med Chem 1993 Aug; 1(2)141-5.
Score: 0.419
Eliminating primers from completed polymerase chain reactions with exonuclease VII.
H H Li ... N Arnheim
Nucleic Acids Res 1991 Jun; 19(11)3139-41.
Score: 0.419
HPLC purification of polymerase chain reaction products for direct sequencing.
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Biotechniques 1991 Feb; 10(2)216-20.
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Characterization of CR1 repeat random PCR markers for mapping the chicken genome.
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Anim Genet 1997 Apr; 28(2)139-45.
Score: 0.418
Species-specific 18S rRNA gene amplification for the detection of P. falciparum and P. vivax malaria parasites.
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Mol Cell Probes 1995 Jun; 9(3)161-5.
Score: 0.418
Self-reporting PNA/DNA primers for PCR analysis.
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Genome Res 2001 Apr; 11(4)609-13.
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A simple method to design PCR primer to detect genomic DNA of parasites and its application to Dirofilaria immitis.
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Mol Cell Probes 1996 Dec; 10(6)423-5.
Score: 0.417
A human heart cDNA library--the development of an efficient and simple method for automated DNA sequencing.
C C Liew
J Mol Cell Cardiol 1993 Aug; 25(8)891-4.
Score: 0.417
New types of primers (stair primers) for PCR amplification of the variable V3 region of the human immunodeficiency virus.
R Colimon ... F Cartier
J Virol Methods 1996 Apr; 58(1-2)7-19.
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Go!Poly: A gene-oriented polymorphism database.
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Hum Mutat 2001 Nov; 18(5)382-7.
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TAGmapper: a web-based tool for mapping SAGE tags.
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PrimeArray: genome-scale primer design for DNA-microarray construction.
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Bioinformatics 2001 Jan; 17(1)98-9.
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Application of polymerase chain reaction assays to studies of herpes simplex virus latency.
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5'-degenerate 3'-dideoxy-terminated competitors of PCR primers increase specificity of amplification.
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Biotechniques 1998 Mar; 24(3)445-50.
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Quality control of PCR primers used in multiplex STR amplification reactions.
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Development of the polymerase chain reaction for diagnosis of chancroid.
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Nested polymerase chain reaction and in situ hybridization for detection of nucleopolyhedrosis.
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Genomic BLAST: custom-defined virtual databases for complete and unfinished genomes.
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FEMS Microbiol Lett 2002 Nov; 216(2)133-8.
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Assignment of 60 human ESTs in cattle.
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Mamm Genome 2000 Sep; 11(9)748-54.
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NCBI GEO: mining millions of expression profiles--database and tools.
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Improved quantitative PCR using nested primers.
L A Haff
PCR Methods Appl 1994 Jun; 3(6)332-7.
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Design and evaluation of new, highly sensitive and specific primers for polymerase chain reaction detection of HIV-1 infected primary lymphocytes.
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Mol Cell Probes 1994 Aug; 8(4)317-22.
Score: 0.414
Disruption of the hypoxanthine-guanine phosphoribosyl-transferase gene caused by a translocation in a patient with Lesch-Nyhan syndrome.
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Amplification of human DNA by primers targeted to Leishmania kinetoplast DNA and post-genome considerations in the detection of parasites by a polymerase chain reaction.
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Am J Trop Med Hyg 2005 Apr; 72(4)423-9.
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A rare mutation in the primer binding region of the amelogenin gene can interfere with gender identification.
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Identification of duck plague virus by polymerase chain reaction.
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Development of a quadriplex polymerase chain reaction for human cytomegalovirus detection.
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Polymerase chain reaction of nanoparticle-bound primers.
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Radiation hybrid map assignments of 11 ESTs obtained from a 28-day-old swine embryo cDNA library to the IMpRH map.
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Multiplex polymerase chain reaction: a practical approach.
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Score: 0.413