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RIC: Research Interest Comparator |
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Researcher
Affiliation: Human Growth and Development
Office: not provided
Phone #: not provided
Fax: not provided
Email: kar-wai.ng@utsouthwestern.edu
Home Page: not provided
Lab: not provided
PathoGene is a web-based resource that streamlines the process of predicting genes in microorganisms and designs polymerase chain reaction (PCR) primers for amplification to facilitate sequence analysis and experimentation. PathoGene currently supports primer design for every complete microbial, viral, and fungal genome as cataloged in GenBank by the National Center for Biotechnology Information (NCBI, http://www.ncbi.nlm.nih.gov/). The resulting primers can then be subjected to a stand-alone BLAST system called PathoBLAST in which the predicted PCR product and/or primers can be compared against the genome of interest or a similar genome to find related genes or estimate primer quality.
Extraction Method: Keyword Count with Lexical Variants Added-
Eliminated words list: MedlinePlus List
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Similarity Method: Weighted Keyword Count
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Weighting Method: Term Frequency * Inverse Document Frequency
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Database: Medline Updates from current month
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Publication Type: All
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Score Calculation Method: Cosine Similarity Method
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Sort by: Score
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Results computed on: 6/9/2006